Presence of Pto DC3000 orthologs in 58 other genera as determined by BLASTP analysis.  Orthology of Pto DC3000 loci (shown in sequential order on the x-axis)
with orfs in selected bacterial genomes (listed on the y-axis) is indicated with colored squares, where intensity of color is proportional to the degree of sequence similarity.

• mobile genetic elements are shown in red
• members of the HrpL regulon are shown in green.
• pseudogenes, evaluated by BLASTN due to the absence of coding sequences, are shown in black
• Variable regions as predicted by the methods described in Lindeberg, 2008 are indicated with black bars at the top of each window

Genomes are listed from top to bottom in the following order:

pseudomonads:

Pto DC3000
Pph 1448A
Psy B728a,
P. fluorescens PfO-1,
P. fluorescens Pf-5 (Pf),
P. putida KT2440,
P. putida F1 (Pp),
P. entomophila L48,
P. stutzeri A1501,
P. mendocina YMP,
P. aeruginosa UCBPP-PA14,
P. aeruginosa PAO1,
P. aeruginosa PA7,

non-pseudomonad gammaproteobacteria

Photorhabdus luminescens subsp. laumondii TTO1,
Shewanella sp. ANA-3,
Shewanella frigidimarina,
Shewanella sp. MR-4,
Yersinia pseudotuberculosis IP 32953,
Yersinia pestis Antiqua,
Yersinia pestis Nepal516,
Pectobacterium atrosepticum SCRI1043,
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
Salmonella enterica subsp. enterica serovar Typhi str. CT18,
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150,
Escherichia coli O157:H7 EDL933,
Escherichia coli O157:H7 str. Sakai,
Escherichia coli UTI89,
Escherichia coli 536,
Escherichia coli K12,
Vibrio parahaemolyticus RIMD 2210633,
Vibrio vulnificus YJ016,
Vibrio vulnificus CMCP6,
Vibrio fischeri ES114,
Vibrio cholerae O1 biovar eltor str. N16961,
Shigella sonnei Ss046,
Shigella flexneri 2a str. 301,
Shigella flexneri 5 str. 8401,
Shigella boydii Sb227,
Shigella dysenteriae Sd197,
Aeromonas hydrophila subsp. hydrophila ATCC 7966

xanthomonads

X. campestris pv. vesicatoria str. 85-10,
X. campestris pv. campestris str. ATCC 33913,
X. axonopodis pv. citri str. 306,
X. oryzae pv. oryzae MAFF 311018,
Xylella fastidiosa Temecula1

beta-proteobateria

Burkholderia xenovorans LB400,
Burkholderia cenocepacia HI2424,
Burkholderia sp. 383,
Burkholderia cepacia AMMD,
Burkholderia pseudomallei K96243,
Burkholderia thailandensis E264,
Burkholderia mallei ATCC 23344,
Ralstonia metallidurans CH34,
Ralstonia eutropha JMP134,
Ralstonia solanacearum GMI1000,
Bordetella bronchiseptica RB50,
Bordetella parapertussis 12822,
Bordetella pertussis Tohama I