P.
syringae is a Gram negative, plant-pathogenic bacterium, strains of which
are noted for their diverse and host-specific interactions with different plant
species. Specific strains are assigned to one of the over 50 known pathovars based
on their ability to infect different plant species. This site is a portal to genome biology resources for sequenced P. syringae strains.
| aceris |
MAFF302273 |
- |
maple |
|
UNC-CH |
draft |
none |
| actinidae |
J-35 |
bacterial canker |
kiwi |
|
NZ IPFR |
see Psa page to view |
none |
| actinidae |
NZ V-13 |
bacterial canker |
kiwi |
|
NZ IPFR |
see Psa page to view |
none |
| actinidae |
LV-5 |
bacterial canker |
kiwi |
|
NZ IPFR |
see Psa page to view |
none |
| actinidae |
MAFF302091 |
bacterial canker |
kiwi |
|
UNC-CH |
draft |
none |
| actinidae |
NCPPB3739 |
bacterial canker |
kiwi |
|
CRA-FRU |
draft |
none |
| actinidae |
NCPPB3871 |
bacterial canker |
kiwi |
|
CRA-FRU |
draft |
none |
| actinidae |
CRA-FRU |
bacterial canker |
kiwi |
|
CRA-FRU |
draft |
none |
| actinidae |
KW41 |
bacterial canker |
kiwi |
|
VBI |
draft |
none |
| actinidae |
CFBP 7286 |
bacterial canker |
kiwi |
|
VBI |
draft |
none |
| actinidae |
CH2010-6 |
bacterial canker |
kiwi |
|
VBI |
draft |
none |
| actinidae |
CH2010-6 |
bacterial canker |
kiwi |
|
VBI |
draft |
none |
aesculi |
2250 |
|
European horse chestnut |
|
Sainsbury |
|
none |
aesculi |
NCPPB 3681 |
leaf spot |
Indian horse chestnut |
|
Sainsbury |
|
none |
| aptata |
DSM50252 |
- |
beet |
|
UNC-CH |
|
none |
| avellanae |
BP631 |
hazelnut decline |
hazelnut |
|
U-Toronto |
|
none |
| avellanae |
Ve013 |
hazelnut decline |
hazelnut |
|
U-Toronto |
|
none |
| avellanae |
Ve037 |
hazelnut decline |
hazelnut |
|
U-Toronto |
|
none |
| Cit7 |
- |
- |
- |
|
UNC-CH |
|
none |
| glycinea |
race 4 |
bacterial blight |
soybean |
Youfu Zhao |
UI-UC |
|
none |
| glycinea |
B076 |
bacterial blight |
soybean |
Youfu Zhao |
UI-UC |
|
none |
| japonica |
MAFF301072 |
- |
barley |
|
UNC-CH |
|
none |
| lachrymans |
MAFF301315 |
- |
cucumber |
|
UNC-CH |
|
none |
| lachrymans |
MAFF302278 |
- |
cucumber |
|
UNC-CH |
|
none |
| maculicola |
ES4326 |
- |
cabbage |
|
UNC-CH |
|
none |
| mori |
MAFF301020 |
- |
mulberry |
|
UNC-CH |
draft |
none |
| morsprunorum |
MAFF302280 |
- |
cherry |
|
UNC-CH |
draft |
none |
oryzae
|
1_6 |
- |
rice |
|
UNC-CH |
|
none |
| panici |
LMG 2367 |
- |
millet |
|
Zhejiang Univ |
draft |
none |
phaseolicola
|
1644R |
- |
bean |
|
U Arizona |
|
none |
| pisi |
1704B |
- |
pea |
|
UNC-CH |
draft |
none |
savastanoi |
NCPPB 3335 |
|
olive |
|
Madrid |
|
none |
syringae |
FF5 |
- |
- |
|
Sainsbury |
|
none |
| syringae |
642 |
- |
- |
|
VBI |
draft |
none |
| syringae |
B64 |
- |
wheat |
|
IPB Zurich |
draft |
none |
| syringae |
SM |
- |
wheat |
|
IPB Zurich |
draft |
none |
tabaci |
ATCC11528 |
|
tobacco |
|
Sainsbury |
|
none |
tabaci |
6605 |
|
tobacco |
|
Sainsbury |
|
none |
| theae |
NCPPB 2598 |
- |
camellia sinensis |
|
VBI |
draft |
none |
tomato
|
|
|
tomato |
|
VBI |
|
minimal |
| tomato |
NCPPB1108 |
- |
tomato |
|
VBI |
draft |
none |
| tomato |
Max13 |
- |
tomato |
|
VBI |
draft |
none |
| tomato |
K40 |
- |
tomato |
|
VBI |
|
none |
| tomato |
NYS-T1 |
- |
tomato |
|
Cornell |
|
none |
| - |
BRIP 34876 |
rot |
barley |
|
CSIRO |
draft |
none |
| - |
BRIP 34881 |
rot |
barley |
|
CSIRO |
draft |
none |
| - |
BRIP 39023 |
symptomless |
wheat |
|
CSIRO |
draft |
none |
| - |
CC1557 |
- |
N. benthaminana |
|
U Arizona |
closed |
none |
| - |
CC1583 |
- |
- |
|
U Arizona |
draft |
none |
| - |
CC1466 |
- |
- |
|
U Arizona |
draft |
none |
All P. syringae genomes registered at NCBI (including those in process)
P. coronafaciens group (1), P. savastanoi group (5), P. syringae group (14), P. syringae group genomosp 3 group (11)
|
|
What's new on this site
See list of recent updates to the structure, tools and databases on this site |
Plant defense-related genes. Using large-scale forward-genetic screens, Nicotiana benthamiana genes have been identified that compromise PAMP-triggered immunity when silenced. Information on these genes can be found at the link in the Quick Links section above. |
| Annotating a new P. syringae genome? Contact the PPI site administrator with questions about annotation of Type III effectors and helpers to avoid perpetuating poor annotations in public databases. 280 new and validated Hop sequences recently added to Database - Hops. An unformatted version of the Hops database has also been generated for easy sorting of fields |
| A model of P. syringae-host interactions based upon comprehensive Gene Ontology annotation of Hop effector proteins. Downloadable format now available. See Modeling host-pathogen interactions with Gene Ontology Annotation. |
8th International Conference on Pseudomonas syringae pathovars and related pathogens (Aug 31-Sept 3, 2010 in Oxford UK)
(photos - login with password "goDC3000") |
SEE THE DISEASE |
Photos of bacterial speck, upstate NY, August, 2009 (ppt) photo credits: Chris Smart, NYSAES, Cornell Univ |
| Pseudomonas syringae at IPM Images |
|
